Publications
2023
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Narawitch Lertngim (2023). Improving Non-invasive Biomass Estimation by Combining Different Types of Image-Based Phenotypic Traits: A Study in Pea under Drought Stress. (MSc Research Practice)
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Stephen N. Njane, Shogo Tsuda, Bart M. van Marrewijk, Gerrit Polder, Kenji Katayama, and Hiroyuki Tsuji (2023). Effect of varying UAV height on the precise estimation of potato crop growth. Frontiers in Plant Science. DOI: https://doi.org/10.3389/fpls.2023.1233349. (Publication)
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Hendrik Poorter, Grégoire M. Hummel, Kerstin A. Nagel, Fabio Fiorani, Philipp von Gillhaussen, Olivia Virnich, Ulrich Schurr, Johannes A. Postma, Rick van de Zedde, and Anika Wiese-Klinkenberg (2023). Pitfalls and potential of high-throughput plant phenotyping platforms. Frontiers in Plant Science. DOI: https://doi.org/10.3389/fpls.2023.1233794. (Publication)
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Marta Nidola (2023). Assessing Water Stress in Maize Using UAV Thermal Infrared Sensing. (MSc thesis)
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Naftali Slob, William Hurst, Rick van de Zedde, and Bedir Tekinerdogan (2023). Virtual reality-based digital twins for greenhouses: A focus on human interaction. Computers and Electronics in Agriculture. DOI: https://doi.org/10.1016/j.compag.2023.107815. (Publication)
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Delfi Dorussen (2023). Exploring plasmotypic variation in Arabidopsis thaliana. (MSc thesis)
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Tom P.J.M. Theeuwen (2023). Exploring the unexplored: Unravelling the cyto-nuclear interactions in Arabidopsis thaliana to improve photosynthesis. (PhD thesis)
2022
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Rutger Vreezen (2022). The effect of including leaf optical and photosynthetic vertical profiles on the functionality of the Digital Tomato Crop. (MSc thesis)
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Jara J. Besó (2022). Unveiling the effect of Burren locus duplication in non-photochemical quenching & cyclic electron flow. (MSc thesis)
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Federico F. Espinosa (2022). Revealing plasmotype variability affecting photosystem II efficiency and growth parameters in Arabidopsis thaliana. (MSc thesis)
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Konrad Łosiński (2022). Identification of genes responsible for Ely’s photosynthesis phenotype. (MSc thesis)
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Tom P.J.M. Theeuwen, Louise L. Logie, Jeremy Harbinson, and Mark G.M. Aarts (2022). Genetics as a key to improving crop photosynthesis. Journal of Experimental Botany. DOI: https://doi.org/10.1093/jxb/erac076. (Publication)
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Bart M. van Marrewijk, Gerrit Polder, and Gert Kootstra (2022). Investigation of the added value of CycleGAN on the plant pathology dataset. IFAC-PapersOnLine. DOI: https://doi.org/10.1016/j.ifacol.2022.11.120. (Publication)
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Tom P.J.M. Theeuwen, Louise L. Logie, Sanne Put, Hedayat Bagheri, Konrad Łosiński, Justine Drouault, Pádraic J. Flood, Corrie Hanhart, Frank F.M. Becker, Raúl Wijfjes, David Hall, David M. Kramer, Jeremy Harbinson, and Mark G.M. Aarts (2022). Plethora of QTLs found in Arabidopsis thaliana reveals complexity of genetic variation for photosynthesis in dynamic light conditions. bioRxiv. DOI: https://doi.org/10.1101/2022.11.13.516256. (Publication)
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Tom P.J.M. Theeuwen, Aaron W. Lawson, Dillian Tijink, Federico Fornaguera, Frank F.M. Becker, Ludovico Caracciolo, Nicholas Fisher, David M. Kramer, Erik Wijnker, Jeremy Harbinson, and Mark G.M. Aarts (2022). The NDH complex reveals a trade-off that constrains maximising photosynthesis in Arabidopsis thaliana. bioRxiv. DOI: https://doi.org/10.1101/2022.11.13.516254. (Publication)
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Rick van de Zedde, and Lili Yao (2022). Book chapter: Field robots for plant phenotyping. Advances in plant phenotyping for more sustainable crop production. Editor: Dr Achim Walter. (Book)
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Robert D. Hall, John C. D’Auria, Antonio C. Silva Ferreira, Yves Gibon, Dariusz Kruszka, Puneet Mishra, and Rick van de Zedde (2022). High-throughput plant phenotyping: a role for metabolomics?. Trends in Plant Science. DOI: https://doi.org/10.1016/j.tplants.2022.02.001. (Publication)
2021
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Sanne Put (2021). Unravelling nuclear natural variation under fluctuating light conditions reveals the complexity of photosynthesis. (MSc thesis)
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Dillian Tijink (2021). Zooming in on plasmotypic variation of Arabidopsis thaliana. (MSc thesis)
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Viviana J. Roman , Rick van de Zedde, Joseph Peller, Richard G. F. Visser, C. Gerard van der Linden, and Eibertus N. van Loo (2021). High-Resolution Analysis of Growth and Transpiration of Quinoa Under Saline Conditions. Frontiers in Plant Science. DOI: https://doi.org/10.3389/fpls.2021.634311. (Publication)
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Lili Yao, George Kowalchuk, and Rick van de Zedde (2021). Recent developments and potential of robotics in plant eco-phenotyping. Emerging Topics in Life Sciences. DOI: https://doi.org/10.1042/ETLS20200275. (Publication)
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Jeremy Harbinson, Mark G.M. Aarts, Herbert van Amerongen, Ralph Bock, Elizabete Carmo-Silva, Roberta Croce, Giovanni Finazzi, Dolf Weijers, and Rene M. Klein Lankhorst (2021). Photosynthesis 2.0. Wageningen University and Research. (Publication)
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Jeremy Harbinson, Martin A.J. Parry, Jess Davies, Norbert Rolland, Francesco Loreto, Ralf Wilhelm, Karin Metzlaff, and René Klein Lankhorst (2021). Designing the Crops for the Future; The CropBooster Program. Biology. DOI: https://doi.org/10.3390/biology10070690. (Publication)
2020
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Aaron Lawson (2020). Revealing cyto-nuclear interactions through phenotypic variation: a study on cybrids of outdoor grown Arabidopsis thaliana. (MSc thesis)
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Pádraic J. Flood, Tom P.J.M. Theeuwen, Korbinian Schneeberger, Paul Keizer, Willem Kruijer, Edouard Severing, and Erik Wijnker (2020). Reciprocal cybrids reveal how organellar genomes affect plant phenotypes. Nature Plants. DOI: https://doi.org/10.1038/s41477-019-0575-9. (Publication)
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Mark Aarts (2020). Faster plant growth through more efficient photosynthesis. Weblog Wageningen University & Research. (Publication)
2019
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Justine Drouault (2019). Exploring the genetics and physiology underlying the non-photochemical quenching phenotype of the Ely nucleus. (MSc thesis)
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Louise Logie (2019). Preliminary exploration of the NPQ phenotype of the Ely nucleotype. (MSc thesis)
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Ayodeji O. Deolu-Ajayi, A. Jessica Meyer, Michel A. Haring, Magdalena M. Julkowska, and Christa Testerink (2019). Genetic Loci Associated with Early Salt Stress Responses of Roots. iScience. DOI: https://doi.org/10.1016/j.isci.2019.10.043. (Publication)
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Ke Yu, Corné M.J. Pieterse, Peter A.H.M. Bakker, and Roeland L. Berendsen (2019). Beneficial microbes going underground of root immunity. Plant, Cell & Environment. DOI: https://doi.org/10.1111/pce.13632. (Publication)
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Weinan Shi, Rick van de Zedde, Huanyu Jiang, and Gert Kootstra (2019). Plant-part segmentation using deep learning and multi-view vision. Biosystems Engineering. DOI: https://doi.org/10.1016/j.biosystemseng.2019.08.014. (Publication)
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Eva Rosenqvist, Dominik K. Großkinsky, Carl-Otto Ottosen and Rick van de Zedde (2019). The Phenotyping Dilemma—The Challenges of a Diversified Phenotyping Community. Frontiers in Plant Science. DOI: https://doi.org/10.3389/fpls.2019.00163. (Publication)